Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAE5
Confidence1.17%DateThu Jan 5 11:12:42 GMT 2012
Rank35Aligned Residues143
% Identity13%Templatec2bl2F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:v-type sodium atp synthase subunit k; PDBTitle: the membrane rotor of the v-type atpase from enterococcus2 hirae
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220... ......230.........240.........250.........260.....
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Query Sequence  ALGVPVWEQVKNTMLITLWVFIGVEGAVVVSAR. . . . . ARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIR
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Template Sequence  QNGGMVFAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLGSDMS. .
Template Known Secondary structure  TT
TTT
GGGGGGT

TT

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   8.10.........20.........30.........40.........50.........60.........70.........80.....
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  NPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICL
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Template Sequence  . . . . . . . . . . VVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKK. . . PEHATKGIIFAAMVETYAILGFVISFLL
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   86...90.........100.........110.........120.... .....130.........140.........150..
 
   346..
Predicted Secondary structure 
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Query Sequence  VLI
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Template Sequence  VLN
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   153..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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