 |
Job Description | P0CF93 | Confidence | 3.37% | Date | Thu Jan 5 11:31:52 GMT 2012 |
Rank | 95 | Aligned Residues | 33 |
% Identity | 9% | Template | d1x4aa1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | UNK |
|
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Q | A | E | T | L | E | A | A | G | H | V | L | L | L | T | S | L | P | E | D | E | Y | S | A | E | Q | V | A | D | C | Y | R | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
| . |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
V | I | R | G | P | A | G | N | N | D | C | R | I | Y | V | G | N | L | . |
P | P | D | I | R | T | K | D | I | E | D | V | F | Y | K |
Template Known Secondary structure |   |
| S | S |
|
|
|
|
|
| S | S |  |  |  |  |  | S |
| . |
| T | T |
|
|  |  |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|