Job Description P0CF93 Confidence 99.91% Date Thu Jan 5 11:31:52 GMT 2012 Rank 2 Aligned Residues 224 % Identity 17% Template d1b7ea_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Transposase inhibitor (Tn5 transposase) Resolution 2.90

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.																						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	L	V	D	G	T	A	I	S	A	P	G	G	G	S	A	E	W	R	L	H	M	G	Y	.	.	D	P	H	T	C	Q	F	T	D	F	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	R	D	A	E	R	L	D	R	F	A	Q	T	A	D	E	I	R
Query Conservation																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		L	A	I	E	D	T	T	S	L	S	Y	.	.	.	.	.	.	R	W	W	V	H	S	V	L	L	L	E	A	T	T	F	R	T	V	G	L	L	H	Q	E	W	W	M	R	P	D	D	P	A	D	A	D	E	K	E	S	G	K	W	L	A	A	A	A	T	S	R	L	R	M	G	S	M	M	S	N	V	I	A
Template Known Secondary structure													.	.	.	.	.	.												T	T	T																S	S	G	G	G							T														G	G	G	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.
Query Sequence		I	A	D	R	G	F	G	S	R	P	E	C	I	R	S	L	A	F	G	E	A	D	Y	I	V	R	V	H	W	R	G	L	R	W	L	T	A	E	.	.	.	.	.	.	.	.	.	G	M	R	F	D	M	M	G	F	L	R	G	L	D	C	G	K	N	G	E	T	T	V	M	I	G	N	S	G	N	K	K	A
Query Conservation																																								.	.	.	.	.	.	.	.	.
Alig confidence											.																													.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		V	C	D	R	E	A	D	I	H	.	A	Y	L	Q	D	K	L	A	H	N	E	R	F	V	V	R	S	K	H	P	R	K	D	V	E	S	G	L	Y	L	Y	D	H	L	K	N	Q	P	E	L	G	G	Y	Q	I	S	I	P	Q	K	G	V	R	P	A	R	K	A	S	L	S	L	R	S	G	R	I	T	L	K
Template Known Secondary structure						S	S				.										T									S			B		T	T	T		S	B							T	S																																	S
Template Predicted Secondary structure											.
Template SS confidence
		186	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		G	A	P	F	P	A	R	L	I	A	V	S	L	P	P	E	K	A	L	I	S	K	T	R	L	L	S	E	N	R	R	K	G	R	V	V	Q	A	E	T	L	E	A	A	G	H	V	L	L	L	T	S	L	P	E	D	E	Y	.	S	A	E	Q	V	A	D	C	Y	R	L	R	W	Q	I	E	L	A	F	K	R
Query Conservation																																																												.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	N	I	T	L	N	A	V	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	N	P	P	K	G	E	T	P	L	K	W	L	L	L	T	S	E	P	V	E	S	L	A	Q	A	L	R	V	I	D	I	Y	T	H	R	W	R	I	E	E	F	H	K	A
Template Known Secondary structure		T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			S	S	S										S	S			S	S													T		T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.																							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.															.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	S	L	L	H	L	D	A	L	R	A	K	E	P	E	L	A	K	A	W	I	F	A	N	L	L	A	A	F	L	I	D	D	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	S	L	D	F	P	P	R	S	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		W	K	T	G	A	G	A	E	R	Q	R	M	P	D	.	N	L	E	R	M	V	S	I	L	S	F	V	A	V	R	L	L	Q	L	R	E	S	F	T	L	P	Q	A	L	R	A	Q	G	L	L	K	E	A	E	H	V	E	S	Q	S	A
Template Known Secondary structure							T	T	T	S	S					.	S																															T	T									T	T		B	S
Template Predicted Secondary structure																.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions