Job Description P0CF93 Confidence 6.96% Date Thu Jan 5 11:31:52 GMT 2012 Rank 25 Aligned Residues 76 % Identity 14% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	H	D	N	W	S	A	I	L	A	H	I	G	K	P	E	E	L	D	T	S	A	R	N	A	G	A	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	R	E	I	R	D	A	A	T	L	L	R	L	G	L	A	Y	G	P	G	G	M	S	L	R	E	V	T	A
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																						.
Template Sequence		L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	.	N	S	C	K	T	A	R	D	I	R	N
Template Known Secondary structure																T	T											T												S	G	G	G	T	T										S	S														.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	Q	L	H	D	V	A	T	L	S	D	V	A	L	L	K	R	L	R	N
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		E	L	.	.	.	.	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R
Template Known Secondary structure			T	.	.	.	.	T			S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		86	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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