Return to main results Retrieve Phyre Job Id

Job DescriptionP37691
Confidence98.10%DateThu Jan 5 11:57:13 GMT 2012
Rank8Aligned Residues174
% Identity20%Templated2c1ia1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30... ......40.........50....... ..60.........70.........80.........90.........100.
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Query Sequence  LAIVIDDF. . . GYRPHNENQVLAMPSAISVAVLPD. SPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSD
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Template Sequence  VALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHS. . . . . . . . . . WSHPILSQLSLD
Template Known Secondary structure  S


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   270.........280.........290.........300.........310.........320....... ..330.........
 
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Query Sequence  EIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLD. .
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Template Sequence  EAKKQITD. . . . . . . . . . . . . . . . . . . . . . . . TEDVLTKVLGSSSKLM. . . RPPYGAITDDIRNSLDLSFIMWDVDSLDW
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   340....... ..350.........360... ......370.........380.........390..
 
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Query Sequence  DSQNEADIRVQFNRAIDLARRNGSTIAIGH. PHPATVRVLQQMVYNLPP. DITLVKASSLLNEP
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Template Sequence  KSKNEASILTEIQ. . . . . HQVANGSIVLMHDIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTR
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   393......400..... ....410.........420.........430.........440.........450.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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