 |
Job Description | P37691 | Confidence | 32.55% | Date | Thu Jan 5 11:57:13 GMT 2012 |
Rank | 86 | Aligned Residues | 96 |
% Identity | 15% | Template | d1nlfa_ |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 1.95 |
|
 |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | P | E | M | S | S | D | E | I | E | R | I | I | R | S | A | V | N | N | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
Y | A | V | G | I | N | N | H | M | G | S | K | M | T | S | N | L | F | G | M | Q | K | V | M | Q | A | L | E | R | Y | N | L | Y | F | L | D | S | V | T | I | G | N | T | Q | A | M | R | A | A |
Query Conservation |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
| . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |   | . | . | . | . | . | . |
Template Sequence |   |
L | P | A | E | D | P | P | T | A | I | H | H | R | L | H | A | L | G | A | H | L | S | A | E | E | R | Q | A | V | A | D | G | L | L | I | Q | P | L | I | G | S | L | P | N | I | M | A | P | E | W | F | D | G | L | K | R | A | A | E | G | R | R | L | M | V | L | D | T | L | R | R | F | H | I | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | S |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| G | G | G | G |
|
| . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
|
|
|
|
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | T | G | V | K | V | I | K | R | K | V | F | L | D | D | S | Q | N | E | A | D | I | R | V | Q | F | N | R | A | I | D | L | A | R | R | N | G | S | T | I | A | I | G | H |
Query Conservation |   |
  |   |   |
|
|
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |
|   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | E | N | A | S | G | P | M | A | Q | V | I | G | R | M | E | A | I | A | A | D | T | G | C | S | I | V | F | L | H |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|