Job Description P37691 Confidence 96.61% Date Thu Jan 5 11:57:13 GMT 2012 Rank 16 Aligned Residues 189 % Identity 14% Template c3qbuD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of putative peptidoglyacn deactelyase (hp0310) from2 helicobacter pylori Resolution 2.57 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	H	N	E	N	Q	V	L	A	M	P	S	A	I	S	V	A	V	L	P	D	S	P	H	A	.	R	E	M	A	T	K	A	H	N	S	G	H	E	V	L	I	H	L	P	M	A	P	L	S	K	Q	P	L	E	K	N	T	L	R	P	E	M	S	S	D	E	I	E	R	I	I	R	S	A	V	N	N	V	P
Query Conservation																											.
Alig confidence																											.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	L	L	K	L	F	K	K	Y	H	L	P	A	T	W	F	V	P	G	H	S	I	E	T	F	P	E	Q	M	K	M	I	V	D	A	G	H	E	V	G	A	H	G	.	.	.	.	.	.	.	.	.	.	Y	S	H	E	N	P	I	A	M	S	T	K	Q	E	E	D	V	L	L	K	S	V	E	L	I	K
Template Known Secondary structure											T	T																								T	T	T					B			.	.	.	.	.	.	.	.	.	.	S	S				G	G	G	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		116	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	V	G	.	.	I	N	N	H	M	G	S	K	M	T	S	N	L	F	G	M	Q	K	V	M	Q	A	L	E	R	Y	N	L	Y	F	L	D	S	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	N	T	Q	A	M	R	A	A	Q	G	T	G	V	K	V	I	K	R	K	V
Query Conservation						.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.														.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		D	L	T	G	K	A	P	T	G	Y	V	A	P	W	W	E	F	S	N	.	.	.	.	I	T	N	E	L	L	L	K	H	G	F	K	Y	D	H	S	L	M	H	N	D	F	T	P	Y	Y	V	R	V	G	D	S	W	S	K	I	D	Y	S	L	E	A	K	D	W	M	K	P	L	I	R	G	V	E	T	N	L
Template Known Secondary structure					S	S								G	G	G			S	S	.	.	.	.								T	T	T									S		S	S	S									B						T	T	S		G	G	G	T					B
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		177																							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.									.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.									.	.	.	.
Query Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	S	Q	N	E	A	D	I	R	V	Q	F	N	R	A	I	D	L	A	R	R	N	G	.	.	.	S	T	I	A	I	G	H	P	.	.	.	.	H	P	A	T	V	R	V	L	Q	Q	M	V	Y	N	L	P	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.									.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.									.	.	.	.
Template Conservation
Template Sequence		V	E	I	P	A	N	W	Y	L	D	D	L	P	P	M	M	F	I	K	K	S	P	N	S	F	G	F	V	S	P	R	D	I	G	Q	M	W	I	D	Q	F	D	W	V	Y	R	E	M	D	Y	A	V	F	S	M	T	I	H	P	D	V	S	A	R	P	Q	V	L	L	M	H	E	K	I	I	E	H	I	N	K
Template Known Secondary structure								G	G	G	B	S								T	T		T	T					S																					S														T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
				228	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	I	T	L	V	K	A	S	S	L	L	N
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		H	E	G	V	R	W	V	T	F	N	E	I	A	D
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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