Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7Y8
Confidence2.96%DateThu Jan 5 11:06:29 GMT 2012
Rank39Aligned Residues20
% Identity15%Templatec3dnlG_
PDB info PDB header:viral proteinChain: G: PDB Molecule:hiv-1 envelope glycoprotein gp120; PDBTitle: molecular structure for the hiv-1 gp120 trimer in the b12-2 bound state
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110........
Predicted Secondary structure 


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Query Sequence  RALSEALEKLWRRHCRLARG
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Template Sequence  EQMHEDIISLWDQSLKPCVK
Template Known Secondary structure  S




Template Predicted Secondary structure 






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   102.......110.........120.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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