Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7Y8
Confidence2.83%DateThu Jan 5 11:06:29 GMT 2012
Rank43Aligned Residues31
% Identity6%Templatec2qbbF_
PDB info PDB header:ribosomeChain: F: PDB Molecule:30s ribosomal protein s6; PDBTitle: crystal structure of the bacterial ribosome from2 escherichia coli in complex with gentamicin. this file3 contains the 30s subunit of the second 70s ribosome, with4 gentamicin bound. the entire crystal structure contains5 two 70s ribosomes and is described in remark 400.
Resolution3.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.
Predicted Secondary structure 












Query SS confidence 































Query Sequence  LPAMDFVVVAKKGVADLDNRALSEALEKLWRR
Query Conservation 
   
 
 
 
          
   
  
  
Alig confidence 















.














Template Conservation 
  

   
  
    .
           
  
Template Sequence  MRHYEIVFMVHPDQSE. QVPGMIERYTAAITG
Template Known Secondary structure 






GGGTT.
Template Predicted Secondary structure 








.
Template SS confidence 































   1........10...... ...20.........30.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions