Return to main results Retrieve Phyre Job Id

Job DescriptionP09996
Confidence11.46%DateThu Jan 5 11:02:37 GMT 2012
Rank98Aligned Residues23
% Identity17%Templated1j5ya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90......
Predicted Secondary structure 


Query SS confidence 






















Query Sequence  AVSDLGQKLGVDTSTASSLLAEQ
Query Conservation   
  

 
 

        

  
Alig confidence 






















Template Conservation 
  


  
 

 


 


  
Template Sequence  SGAQLAEELSVSRQVIVQDIAYL
Template Known Secondary structure 
TS
Template Predicted Secondary structure 



Template SS confidence 






















   26...30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions