Return to main results Retrieve Phyre Job Id

Job DescriptionP09996
Confidence49.52%DateThu Jan 5 11:02:37 GMT 2012
Rank10Aligned Residues39
% Identity26%Templatec3c4iA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna-binding protein hu homolog; PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv]
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110
Predicted Secondary structure 









Query SS confidence 






































Query Sequence  TNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEV
Query Conservation   
 
  

 
 

        

  

  

 


 
  
Alig confidence 






































Template Conservation   


  

     
   
  

      
   
  
  
Template Sequence  AELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSV
Template Known Secondary structure  T

TT

Template Predicted Secondary structure 





Template SS confidence 






































   4.....10.........20.........30.........40..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions