Return to main results Retrieve Phyre Job Id

Job DescriptionP09996
Confidence30.05%DateThu Jan 5 11:02:37 GMT 2012
Rank28Aligned Residues33
% Identity18%Templatec2w7nA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100........
Predicted Secondary structure 







Query SS confidence 
































Query Sequence  SDLGQKLGVDTSTASSLLAEQLPKIIDALSPQG
Query Conservation    

 
 

        

  

  

 


 
Alig confidence 
































Template Conservation    

   




 
   



   
     
  
Template Sequence  ATFATSLGLTRGAVSQAVHRVWAAFEDKNLPEG
Template Known Secondary structure  T

T


TT
Template Predicted Secondary structure 








Template SS confidence 
































   38.40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions