Return to main results Retrieve Phyre Job Id

Job DescriptionP38038
Confidence65.67%DateThu Jan 5 11:57:50 GMT 2012
Rank148Aligned Residues76
% Identity12%Templated1iowa1
SCOP infoPreATP-grasp domain PreATP-grasp domain D-Alanine ligase N-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.... .....80.........90.........100.........110.........120.........130.....
Predicted Secondary structure 






...






















Query SS confidence 














. . .




























































Query Sequence  EMPGITIISASQTGN. . . ARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFL
Query Conservation      
 







 ...

 

  
   
   
    
  
 
     
     

 
 

 



 



  
   
Alig confidence 














...




























































Template Conservation 
   
 

 

 
 
  


 

  
  

      
  
         
     
 

  


  



 

 


  
Template Sequence  MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELM
Template Known Secondary structure 





SSTTTT

TTTS
GGGTTTTT


STTTSSS
Template Predicted Secondary structure 































Template SS confidence 














































































   1........10.........20.........30.........40.........50.........60.........70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions