 |
Job Description | P38038 | Confidence | 65.67% | Date | Thu Jan 5 11:57:50 GMT 2012 |
Rank | 148 | Aligned Residues | 76 |
% Identity | 12% | Template | d1iowa1 |
SCOP info | PreATP-grasp domain
| PreATP-grasp domain
| D-Alanine ligase N-terminal domain
|
Resolution | 1.90 |
|
 |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | P | G | I | T | I | I | S | A | S | Q | T | G | N | . |
. |
. |
A | R | R | V | A | E | A | L | R | D | D | L | L | A | A | K | L | N | V | K | L | V | N | A | G | D | Y | K | F | K | Q | I | A | S | E | K | L | L | I | V | V | T | S | T | Q | G | E | G | E | P | P | E | E | A | V | A | L | H | K | F | L |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
|
|   | . | . | . |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |
|
|
|
|   |
|
|
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|   |
|
|   |
|   |
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|
|   |   |
Template Sequence |   |
M | T | D | K | I | A | V | L | L | G | G | T | S | A | E | R | E | V | S | L | N | S | G | A | A | V | L | A | G | L | R | E | G | G | I | D | A | Y | P | V | D | P | K | E | V | D | V | T | Q | L | K | S | M | G | F | Q | K | V | F | I | A | L | H | G | R | G | G | E | D | G | T | L | Q | G | M | L | E | L | M |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | T | S |
| G | G | G | T | T | T | T | T |  |  |  |  |  |  |
|
|
| S | T | T | T | S | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|