Return to main results Retrieve Phyre Job Id

Job DescriptionP38038
Confidence100.00%DateThu Jan 5 11:57:50 GMT 2012
Rank15Aligned Residues213
% Identity29%Templated1f20a1
SCOP infoReductase/isomerase/elongation factor common domain Riboflavin synthase domain-like NADPH-cytochrome p450 reductase FAD-binding domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260..... ....270.........280.........290.........300....
Predicted Secondary structure 
















.



















....
Query SS confidence 



































.






































. . . .
Query Sequence  PYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD. SGMRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTV. . . .
Query Conservation        
  
 
  
  

         

 


  .    
  

 
 
 
 
    
   
  
 

    
 
....
Alig confidence 



































.






































....
Template Conservation           
 
  
  

     
   

 


     
 
  

 
 
 
 
    
   
  
 
       
    
Template Sequence  NVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEM
Template Known Secondary structure  TS


S
TT
SS

TT
GGG


TT





TTBSS


TTS
Template Predicted Secondary structure 




































Template SS confidence 















































































   986...990.........1000.........1010.........1020.........1030.........1040.........1050.........1060.....
 
   305....310.........320.. .......330........ .340.........350...... ...
Predicted Secondary structure  ..................









.





....


..


Query SS confidence  . . . . . . . . . . . . . . . . . .

















.















. . . .

















. .


Query Sequence  . . . . . . . . . . . . . . . . . . EGKTLPLNEALQWHFELT. VNTANIVENYATLTRS. . . . ETLLPLVGDKAKLQHYAA. . TTP
Query Conservation  ..................      
   
    

 .      
   
     ....  
               ..   
Alig confidence  ..................

















.















....

















..


Template Conservation                   
   
 

  

    

   
 
  
  

    
  

  
  
      
         
Template Sequence  LEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSKGLQEYEEWKWGKNPT
Template Known Secondary structure  SSSTT


SS
SB
TB

SS


TTB

TT
S


Template Predicted Secondary structure 









































Template SS confidence 















































































   1066...1070.........1080.........1090.........1100.........1110.........1120.........1130.........1140.....
 
   360..... ....370.........380.........390.........400.........410... ......420.........430.....
Predicted Secondary structure  .

























...













Query SS confidence 





.















































. . .





















Query Sequence  IVDMVR. FSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE. . . GRARAGGASSFLADRVEEEGEV
Query Conservation    


 .
      
  

  

 
 

 






      
 


  
     ...   
 
  
  
   
  
  
Alig confidence 





.















































...













.






Template Conservation   



  


   

  

  

 
 

 






   
  
 


 

   
       
 



 

  .
  
  
Template Sequence  MVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR. IQADDVV
Template Known Secondary structure  STTB
B
S
B




S
TTTSTT


GGGTS

TT.

TT
Template Predicted Secondary structure 






























.




Template SS confidence 















































































   1146...1150.........1160.........1170.........1180.........1190.........1200.........1210....... ..1220....
 
   436...440...
Predicted Secondary structure 


Query SS confidence 







Query Sequence  RVFIEHND
Query Conservation   
      
Alig confidence 







Template Conservation     

 

Template Sequence  PCFVRGAP
Template Known Secondary structure 


Template Predicted Secondary structure 


Template SS confidence 







   1225....1230..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions