Job Description P38038 Confidence 62.77% Date Thu Jan 5 11:57:50 GMT 2012 Rank 151 Aligned Residues 90 % Identity 8% Template c3t66A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nickel abc transporter (nickel-binding protein); PDBTitle: crystal structure of nickel abc transporter from bacillus halodurans Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	A	E	M	P	G	I	T	I	I	S	A	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H	K	F	L	F
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		K	D	G	E	P	L	H	F	T	V	L	T	Y	G	S	R	A	E	L	P	L	I	A	Q	V	F	Q	S	N	A	K	Q	I	G	I	E	V	E	I	R	Q	I	E	V	P	E	E	Y	M	A	S	N	R	D	W	D	L	I	T	Y	S	N	V	.	T	S	P	R	G	D	A	G	Y	Y	L	N	A	T	Y	H
Template Known Secondary structure			T	T											S	S	S	T	T															T	T									S	S	S	T					T		T	T										.	S		T	T	S											S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		137	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	K	A	P	K	L	E	N	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	G	A	L	N	F	S	S	V	N
Template Known Secondary structure		T	T		T	T			S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions