Job Description P38038 Confidence 97.24% Date Thu Jan 5 11:57:50 GMT 2012 Rank 124 Aligned Residues 148 % Identity 18% Template c3rpeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. Resolution 1.10 Å

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		62	.	.	.	.	.	.	.	70	.						.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure												.	.	.	.	.				.																										.	.	.	.	.
Query SS confidence												.	.	.	.	.				.																										.	.	.	.	.
Query Sequence		P	G	I	T	I	I	S	A	S	Q	.	.	.	.	.	T	G	N	.	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	.	.	.	.	.	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A
Query Conservation												.	.	.	.	.				.																										.	.	.	.	.
Alig confidence												.	.	.	.	.				.																										.	.	.	.	.																					.
Template Conservation																																																																							.
Template Sequence		S	N	V	L	I	I	N	A	M	K	E	F	A	H	S	K	G	A	L	N	L	T	L	T	N	V	A	A	D	F	L	R	E	S	G	H	Q	V	K	I	T	T	V	D	Q	G	Y	D	I	E	S	E	I	E	N	Y	L	W	A	D	T	I	I	Y	Q	M	P	A	W	.	W	M	G	E	P	W	I	L	K	K
Template Known Secondary structure													B	T	T	B		S																	T	T								G	G	G															S									B	.	T	T	B
Template Predicted Secondary structure																																																																							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80
		131	.	.	.	.	.	.																						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	K	F	L	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	A	P	K	L	E	N	T	A	F	A	V	F	S	L	G	D	S	S	Y	E	F	F	C	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	G	K	D	F	D	S	K	L	A	E	L	G	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	D	E	V	F	T	D	G	H	G	R	L	Y	Q	S	D	G	R	T	R	S	D	A	T	K	G	Y	G	S	G	G	L	I	Q	G	K	T	Y	M	L	S	V	T	W	N	A	P	R	E	A	F	T	D	P	E	Q	F	F	H	G	V	G	V	D	G	V	Y	L	P	F	H	K	A	N	Q	F	L	G	M
Template Known Secondary structure										T	B	T	T	T	B				S			S	T	T	T	T	S		T	T			B	S		T	T										S	S		T						T	T	S	T	T	T	T							T										T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	L	D	R	V	D	A	D	V	E	Y	Q	A	A	A	S	E	W	R	A	R	V	V	D	A	L	K	S	R	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	L	P	T	F	M	C	N	D	V	I	K	Q	P	D	I	E	G	D	I	A	R	Y	R	Q	H	L	A	E	N	V	N
Template Known Secondary structure											S	T	T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions