Job Description P38038 Confidence 32.97% Date Thu Jan 5 11:57:50 GMT 2012 Rank 201 Aligned Residues 76 % Identity 9% Template c3lvuB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of abc transporter, periplasmic substrate-binding2 protein spo2066 from silicibacter pomeroyi Resolution 1.79 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		P	A	A	E	M	P	G	I	T	I	I	S	A	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	K	.	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		P	D	G	A	P	L	A	L	R	F	L	L	R	Q	G	D	S	D	X	Q	T	V	L	E	I	Y	T	R	A	L	E	R	L	G	I	A	A	Q	I	E	K	V	D	N	A	Q	Y	T	A	R	V	A	E	L	D	F	D	L	T	P	F	R	R	D	L	S	L	S	P	G	N	E	Q	R	L	Y	W
Template Known Secondary structure		T	T	S	S	B									T	T																		T	T																			T	T			S										S	S			T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions