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Job DescriptionP38038
Confidence97.40%DateThu Jan 5 11:57:50 GMT 2012
Rank122Aligned Residues143
% Identity12%Templatec3lcmB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70 .........80.........90.........100.. .......110.....
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Query Sequence  GITIISAS. . QTGNARRVAEALRDDLLAAKLNVKLVNAGDYK. . . . . . . . . . . . . . . . . . . . . . . . . FKQIASEKLLIVV
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Template Sequence  KILIVYTHPNPTSFNAEILKQVQTNLS. KEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFI
Template Known Secondary structure 

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   2.......10.........20........ .30.........40.........50.........60.........70.........80
 
   116...120.........130....... ..140.........150.........160....... ..170.........180.
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Query Sequence  TSTQGEGEPPEEAVALHKFLFS. . . . . . . . . . KKAPKLENTAFAVFSLGDSSYEFFCQSGKD. . . . FDSKLAELGGERLL
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Template Sequence  FPIW. WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPCAISPVK
Template Known Secondary structure 
B.TTB

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   81... .....90.........100.........110.........120.........130.........140.........150.........
 
   182.......190 .........200.......
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Query Sequence  DRVDADVEY. . QAAASEWRARVVDALKS
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Template Sequence  LTELTSIEKISDDERQKLLHKVAQITRN
Template Known Secondary structure 
STTTS
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   160.........170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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