Job Description P38038 Confidence 97.53% Date Thu Jan 5 11:57:50 GMT 2012 Rank 119 Aligned Residues 144 % Identity 14% Template c3k1yE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:oxidoreductase; PDBTitle: x-ray structure of oxidoreductase from corynebacterium2 diphtheriae. orthorombic crystal form, northeast structural3 genomics consortium target cdr100d Resolution 2.50 Å

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		61	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.																				.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure												.	.																				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	G	I	T	I	I	S	A	S	.	.	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	.	.	.	.	.	.	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	A	S	E	K	L	L	I
Query Conservation												.	.																				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	R	T	L	A	V	I	S	A	G	L	S	T	P	S	S	T	R	Q	I	A	D	S	I	S	E	A	V	T	A	A	V	S	A	R	G	E	A	L	S	V	S	T	I	E	L	S	E	L	I	P	D	L	X	T	A	X	T	T	R	V	H	T	T	K	L	E	E	I	T	S	A	L	S	A	S	D	G	L	V
Template Known Secondary structure													S	S	S																				T	T	T										G	G	G										T		S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H	K	F	L	F	S	K	K	A	P	K	L	E	N	T	A	F	A	V	F	S	L	G	D	S	S	Y	E	F	F	C	Q	S	G	K	D	F	D	S	K	L	A	E	L	G	G	E	R	L	L	D	.	.	.	.	.	.	.	.	.	R	V
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence								.																.	.	.																					.																								.	.	.	.	.	.	.	.	.
Template Conservation								.																.	.	.																					.
Template Sequence		V	A	T	P	V	F	.	K	A	S	Y	T	G	L	F	K	X	F	F	D	I	L	.	.	.	D	T	D	A	L	T	G	X	P	T	I	I	A	A	T	A	G	S	A	R	.	H	S	L	V	L	D	Y	A	L	R	P	L	L	S	Y	X	R	A	V	V	V	P	T	G	V	F	A	A	T	E	D	F	G	G
Template Known Secondary structure							B	.	T	T	B												S	.	.	.		T	T	S	S	T	T										S	S	S	T	.	T	T	T					T								T	T					S							G	G	G		S	S
Template Predicted Secondary structure								.																.	.	.																					.
Template SS confidence
		81	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	D	V	E	Y	Q	A	A	A	S	E	W	R	A	R	V	V	D	A	L	K	S	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	G	A	E	F	N	K	R	I	A	R	A	A	G	E	L	A	S	L	I	V	E	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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