Job Description P38038 Confidence 36.46% Date Thu Jan 5 11:57:50 GMT 2012 Rank 191 Aligned Residues 87 % Identity 11% Template c3h9dB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:microtubule-associated protein 1a/1b, light chain 3, PDBTitle: crystal structure of trypanosoma brucei atg8 Resolution 2.30 Å

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		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A	D	E	A	P	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	D	.	G	V
Query Conservation																																																																															.
Alig confidence																				.																																																											.
Template Conservation																				.
Template Sequence		P	D	R	L	P	I	I	C	E	K	V	Y	N	S	D	I	G	E	.	L	D	R	C	K	F	L	V	P	S	D	L	T	V	G	Q	F	V	S	V	L	R	K	R	V	Q	L	E	A	E	S	A	L	F	V	Y	T	N	D	T	V	L	P	S	S	A	Q	M	A	D	I	Y	S	K	Y	K	D	E	D	G	F
Template Known Secondary structure		T	T										T	T			S			.		S								T	T		B													T			T	T	S							T	T					T	T	S	B											T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	I	D	L	A	W	S	R	D	Q
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	Y	M	K	Y	S	G	E	A
Template Known Secondary structure		.	.	.									.
Template Predicted Secondary structure		.	.	.
Template SS confidence
					107	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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