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Job DescriptionP38038
Confidence98.02%DateThu Jan 5 11:57:50 GMT 2012
Rank106Aligned Residues124
% Identity16%Templatec3edoA_
PDB info PDB header:flavoproteinChain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90 .........100.........110...
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Query Sequence  AEMPGITIISASQTGNARRVAEALRDDLLAAK. . . . . . . . . . . . . . . . . . . . . . . . . LNVKLVNAGDYKFKQIASEKLLI
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Template Sequence  GXAKKTLILYYSWSGETKKXAEKINSEIKDSELKEVKVSEGTFDADYKTSDIALDQIQGNKDFPEIQLDNIDYNNYDLIL
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   0.........10.........20.........30.........40.........50.........60.........70.........
 
   114.....120.........130.........140.........150.. .......160.........170.........180.........190..
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Query Sequence  VVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFS. LGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQA
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Template Sequence  IGSPVW. SGYPATPIKTLLDQ. . . . . . XKNYRGEVASFFTSAGTNHKAYVSHFNEW. . . . . . ADGLNVIGVARDDSE. . .
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   81..... ...90.........100 .........110.........120......... 130.........140....
 
   193......
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Query Sequence  AASEWRA
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Template Sequence  . VDKWSK
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   145....150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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