Return to main results Retrieve Phyre Job Id

Job DescriptionP38038
Confidence98.71%DateThu Jan 5 11:57:50 GMT 2012
Rank96Aligned Residues145
% Identity18%Templatec3d7nA_
PDB info PDB header:electron transportChain: A: PDB Molecule:flavodoxin, wrba-like protein; PDBTitle: the crystal structure of the flavodoxin, wrba-like protein from2 agrobacterium tumefaciens
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90....... ..100.........110.........120.........130........
Predicted Secondary structure 










.


















.
Query SS confidence 




































.








































.
Query Sequence  MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVN. AGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSK.
Query Conservation     
 







 

 

  
   
   
    
  .
 
     
     

 
 

 



 



  
   
   .
Alig confidence 




































.





















.

















.
Template Conservation    
 



 
  


   
  

 
                     
  

 

 


 
.        
 


      
Template Sequence  SSNTVVVYHSGYGHTHRXAEAVAEGAEATLHAIDAEGNLSEDGWAALDAADAIIFGTPTY. XGGPSWQFKKFADASSKPW
Template Known Secondary structure 




SSST


TTS



S.TT
T
Template Predicted Secondary structure 



























.




Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60..... ....70.........80....
 
   139140.........150.........160.........170.........180...... ...190.........200.......
Predicted Secondary structure 
















........



Query SS confidence 















































. . . . . . . .




















Query Sequence  KAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDA. . . . . . . . DVEYQAAASEWRARVVDALKS
Query Conservation      
  
 








 
  

   
 

 

  


 

   
  ........
   
  
  
   
   
  
Alig confidence 







































.






........




















Template Conservation        

    
 
 
   

       
   
   

 . 
                 

 

 

  

  
  
Template Sequence  FSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGL. WVSLGYIAPXAQSEXSVGDLETARLYGARVANVARQ
Template Known Secondary structure  TTTTTT
SS
TT
.





S




Template Predicted Secondary structure 
















.













Template SS confidence 












































































   85....90.........100.........110.........120.... .....130.........140.........150.........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions