Job Description P38038 Confidence 28.36% Date Thu Jan 5 11:57:50 GMT 2012 Rank 208 Aligned Residues 123 % Identity 12% Template c3d3kD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:enhancer of mrna-decapping protein 3; PDBTitle: crystal structure of human edc3p Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	N	P	E	Q	L	A	R	L	Q	A	A	T	T	.	.	D	L	T	P	T	Q	L	A	W	V	S	G	Y	F	W	G	V	L	N	Q	Q	P	A	A	L	A	A	T	P	A	P	A	A	E	M	P	G	I	T	I	I	S	A	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K
Query Conservation																.	.
Alig confidence																.	.																													.	.	.	.	.	.	.									.	.
Template Conservation																																														.	.	.	.	.	.	.									.	.
Template Sequence		I	S	Y	E	L	H	K	K	L	L	S	V	A	E	K	H	G	L	T	L	E	R	R	L	E	M	T	G	V	C	A	S	Q	M	A	L	T	L	L	G	G	P	Q	R	.	.	.	.	.	.	.	P	T	V	A	L	L	C	G	.	.	P	H	V	K	G	A	Q	G	I	S	C	G	R	H	L	A	N	H	D
Template Known Secondary structure																	T	T																						T						.	.	.	.	.	.	.									.	.	S	S																T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.									.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.								.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		91	.	.	.	.	.	.	.	.	100	.																							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.					.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.					.	.	.
Query Sequence		L	N	V	K	L	V	N	A	G	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	.	P	P	E	E	.	.	.	A	V	A	L	H	K	F	L	F	S	K	K	A	P	K	L	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.					.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.					.	.	.
Template Conservation
Template Sequence		V	Q	V	I	L	F	L	P	N	F	V	K	M	L	E	S	I	T	N	E	L	S	L	F	S	K	T	Q	G	Q	Q	V	S	S	L	K	D	L	P	T	S	P	V	D	L	V	I	N	C	L	D	C	P	E	N	V	F	L	R	D	Q	P	W	Y	K	A	A	V	A	W	A	N	Q	N	R	A	P	V	L	S
Template Known Secondary structure												S	S													T	T	S	S					S		G	G	G	S		S	S			S									T	T		G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions