Job Description P38038 Confidence 25.31% Date Thu Jan 5 11:57:50 GMT 2012 Rank 219 Aligned Residues 85 % Identity 14% Template c2zpnB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:autophagy-related protein 8; PDBTitle: the crystal structure of saccharomyces cerevisiae atg8-2 atg19(412-415) complex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.		.	.	.	510	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A	D	E	A	P	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	.	K	D	G	V	L
Query Conservation																																																																												.
Alig confidence																			.																																																									.					.
Template Conservation																			.																																																														.
Template Sequence		N	R	I	P	V	I	C	E	K	A	E	K	S	D	I	P	E	.	I	D	K	R	K	Y	L	V	P	A	D	L	T	V	G	Q	F	V	Y	V	I	R	K	R	I	M	L	P	P	E	K	A	I	F	I	F	V	N	D	T	L	P	P	T	A	A	L	M	S	A	I	Y	Q	E	H	K	D	K	D	G	F	.
Template Known Secondary structure		S										S	S			S			.		S								T	T		B												T	T			T	T	S							T	T	B				T	T		B											T	T	S	S	.
Template Predicted Secondary structure																			.																																																														.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		512	.	.	.	.	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	I	D	L	A	W	S	R	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	Y	V	T	Y	S	G	E
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				105	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions