 |
Job Description | P38038 | Confidence | 46.73% | Date | Thu Jan 5 11:57:50 GMT 2012 |
Rank | 168 | Aligned Residues | 60 |
% Identity | 12% | Template | c2xhzC_ |
PDB info |
PDB header:isomerase | Chain: C: PDB Molecule:arabinose 5-phosphate isomerase; |
PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography
|
Resolution | 2.60 Å |
|
 |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | P | G | I | T | I | I | S | A | S | Q | T | G | N | A | R | R | V | A | E | A | L | R | D | D | L | L | A | A | K | L | N | V | K | L | V | N | A | G | D | Y | K | F | K | Q | I | A | . |
. |
S | E | K | L | L | I | V | V | T | S | T | Q | G | E |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   | . | . |   |   |   |   |
|
|   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|   |
|   | . | . |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |
Template Sequence |   |
W | C | K | G | K | V | V | V | M | G | M | . |
. |
G | A | S | G | H | I | G | R | K | M | A | A | T | F | A | S | T | G | T | P | S | F | F | V | H | P | G | E | A | A | H | G | D | L | G | M | V | T | P | Q | D | V | V | I | A | I | S | N | S | G | E |
Template Known Secondary structure |   |
T |
| S | S |
|  |  |  |  |  |
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
|  |  |  |  |  |  | T | T | S | T | T |
|
| T | T |
|  |  |  |  |  |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|