Job Description P38038 Confidence 99.91% Date Thu Jan 5 11:57:50 GMT 2012 Rank 49 Aligned Residues 153 % Identity 20% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		P	G	I	T	I	I	S	A	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H	.	.	.	.	.	K	F	L	F
Query Conservation																																																																									.	.	.	.	.
Alig confidence																													.																																												.	.	.	.	.
Template Conservation																													.
Template Sequence		A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	.	E	V	M	A	K	P	L	N	V	N	R	A	D	V	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S	W	E	E	F	L	P
Template Known Secondary structure			S								S	S	S											T	T	S		T	.	T	T	B						G	G	G										S									B	T	T	T	B		S	S	G	G	G	T		S	S							G	G
Template Predicted Secondary structure																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																						.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	K	A	P	K	L	E	N	T	A	F	A	V	F	S	L	G	D	S	S	Y	.	.	E	F	F	C	Q	S	G	K	D	F	D	S	K	L	A	E	L	G	G	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	R	V	D	A	D	V	E	Y	Q	A	A
Query Conservation																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V	G	R	W	P	A	K	G	Y	G	F	E	D	S	L	A	V	V	E	G	E	F	L	G	L	A	L	D	Q	D	N	Q	A	A	L
Template Known Secondary structure		G	G	T	T				T	T											T	T	T		T	T	S	T	T	T											T	T	T										T	T	S			S			T	T			T	T			S	S					T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	E	W	R	A	R	V	V	D	A	L	K	S	R	A	P	V	A	A	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	E	R	L	K	G	W	L	S	L	I	A	A	D	F	G	L	V	L	P	A
Template Known Secondary structure													T					T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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