Job Description P38038 Confidence 100.00% Date Thu Jan 5 11:57:50 GMT 2012 Rank 9 Aligned Residues 276 % Identity 26% Template c2rc5D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: refined structure of fnr from leptospira interrogans Resolution 2.43 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.										.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	K	D	A	P	L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	.	.	.	.	.	.	.	.	.	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	M	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P	A	L	V	K	E	L	V	E	L	L	W	L	K	G	D	E	P
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	K	S	N	P	Y	K	A	K	V	I	S	N	V	L	L	T	P	E	T	G	T	G	K	R	P	K	K	E	G	E	A	L	V	H	R	I	V	L	A	I	D	H	S	A	Y	P	Y	V	I	G	Q	S	G	G	V	I	P	P	G	E	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B	B	T	T	B													S			T	T	S	S	S	S		T	T	S														T	T	T					T	T								S	S	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	V	E	G	K	T	L	P	L	N	E	A	L	Q	W	H	F	E	L	T	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	E	T	L	L	P	L	V	G	D	K	A	K	L	Q	H	Y	A	A	T	T	P	I	V	D	M	V	R	F	S	P	A	Q	L	D	A	E	A	L	I	N	L	L	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	K	A	K	G	L	A	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																								80	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																																						.
Query SS confidence																																.	.	.	.																																						.
Query Sequence		P	L	T	P	R	L	Y	S	I	A	S	S	Q	A	E	V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	.	.	.	.	V	E	G	R	A	R	A	G	G	A	S	S	F	L	A	D	R	V	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	.	A	N	P	E	T	P	V	I
Query Conservation																																.	.	.	.																																						.
Alig confidence																																.	.	.	.																	.																					.
Template Conservation																																																				.
Template Sequence		G	Y	T	V	R	L	Y	S	I	A	S	P	S	Y	F	G	M	K	E	D	N	I	E	F	I	I	K	R	D	N	I	Y	D	E	N	G	N	I	Q	F	K	G	V	C	S	N	Y	M	C	D	.	L	K	P	G	D	E	V	T	M	T	G	P	S	G	K	K	F	L	L	P	N	T	D	F	S	G	D	I	M
Template Known Secondary structure		B								B		S							S	S											B			B	T	T	T	B		S		B									T	.			T	T											S	S	S				S	S		B		S
Template Predicted Secondary structure																																																				.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.				.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.						.	.	.	.
Predicted Secondary structure																							.	.	.																																																.	.	.	.	.
Query SS confidence																							.	.	.																																																.	.	.	.	.
Query Sequence		M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A	D	.	.	.	E	A	P	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	D	G	V	L	T	R	I	D	L	A	W	S	R	D	Q	K	E	.	.	.	.	.	K	V	Y	V
Query Conservation																							.	.	.																																																.	.	.	.	.
Alig confidence																							.	.	.																	.																															.	.	.	.	.
Template Conservation																																										.
Template Sequence		F	L	A	T	G	T	G	I	A	P	F	I	G	M	S	E	E	L	L	E	H	K	L	I	K	F	T	G	N	I	T	L	V	Y	G	A	P	Y	S	D	.	E	L	V	M	M	D	Y	L	K	G	L	E	S	K	H	K	N	F	K	L	I	T	A	I	S	R	E	E	K	N	S	F	D	G	G	R	M	Y	I
Template Known Secondary structure						G	G	G	G												T	T		S	S		B		S									S	S	G	G	.	G			S												S	S								T	T	T		B		T	T	T	S	S	B
Template Predicted Secondary structure																																										.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	K	L	R	E	Q	G	A	E	L	W	R	W	I	N	D	G	A	H	I	Y	V	C	G	D	A	N	R	M	A	K	D	V	E	Q	A	L	L	E	V	I	A	E	F	G	G	M	D	T	E	A	A	D	E	F	L	S	E	L	R	V	E	R	R	Y	Q	R	D	V	Y
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		S	H	R	V	R	E	Q	A	E	A	V	K	K	I	L	N	G	G	G	R	F	Y	I	C	G	G	P	K	G	M	E	K	G	V	I	E	E	I	Q	K	I	S	G	N	T	G	.	.	.	.	.	T	Y	E	E	F	K	H	H	L	E	G	A	H	Q	L	F	V	E	T	Y
Template Known Secondary structure								T										T	T								S	S	T	T	T													T			S	.	.	.	.	.												T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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