Job Description P38038 Confidence 100.00% Date Thu Jan 5 11:57:50 GMT 2012 Rank 6 Aligned Residues 395 % Identity 29% Template c2qtzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methionine synthase reductase; PDBTitle: crystal structure of the nadp+-bound fad-containing fnr-like module of2 human methionine synthase reductase Resolution 1.90 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	S	R	A	P	V	A	A	P	S	Q	S	V	A	T	G	A	V	N	E	I	H	T	S	P	Y	S	K	D	A	P	L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	M	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	R	S	V	P	P	L	S	Q	A	S	L	N	I	P	G	L	P	P	E	Y	L	Q	V	H	L	Q	E	S	P	V	F	Q	V	P	I	S	K	A	V	Q	L	T	T	N	D	A	I	K	T	T	L	L	V	E	L	D	I	S	N	T	D	F	S	Y	Q	P	G	D	A	F	S	V	I	C	P	N	S	D
Template Known Secondary structure		T	T	B			T	T	G	G	G																																		S		T	T		S	S										T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.																		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																	.	.	.	.
Query Sequence		A	L	V	K	E	L	V	E	L	L	W	L	K	G	D	E	P	V	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	T	L	P	L	N	E	A	L	Q	W	H	F	E	L	T	.	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	.	.	.	.	E	T	L	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																	.	.	.	.
Template Conservation
Template Sequence		S	E	V	Q	S	L	L	Q	R	L	Q	L	E	D	K	R	E	H	V	L	L	K	I	K	A	D	T	K	K	K	G	A	T	L	P	Q	H	I	P	A	G	C	S	L	Q	F	I	F	T	W	C	L	E	I	R	A	I	P	K	K	A	F	L	R	A	L	V	D	Y	T	S	D	S	A	E	K	R	R	L	Q
Template Known Secondary structure											T	T		G	G	G	T	T								T	T				T	T					T	T	S		T	T										T	B		T	T	S												T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		343	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.				.	.
Predicted Secondary structure															.	.	.											.																																																	.	.	.
Query SS confidence															.	.	.											.																																																	.	.	.
Query Sequence		P	L	V	G	D	K	A	K	L	Q	H	Y	A	.	.	.	A	T	T	P	I	V	D	M	V	R	.	F	S	P	A	Q	L	D	A	E	A	L	I	N	L	L	R	P	L	T	P	R	L	Y	S	I	A	S	S	Q	A	E	V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	V	E	.	.	.	G	R
Query Conservation															.	.	.											.																																																	.	.	.
Alig confidence															.	.	.											.																																																	.	.	.
Template Conservation
Template Sequence		E	L	C	S	K	Q	G	A	A	D	Y	S	R	F	V	R	D	A	A	C	L	L	D	L	L	L	A	F	P	S	C	Q	P	P	L	S	L	L	L	E	H	L	P	K	L	Q	P	R	P	Y	S	C	A	S	S	S	L	F	H	P	G	K	L	H	F	V	F	N	I	V	E	F	L	S	T	A	T	T	E	V
Template Known Secondary structure					S	S	T	T								T	T												S	T	T	B													B										S		T	T	T	S	T	T														S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																																.	.	.	.	.	.
Query SS confidence																.	.																																																.	.	.	.	.	.
Query Sequence		A	R	A	G	G	A	S	S	F	L	A	D	R	V	.	.	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A	.	.	.	.	.	.	D	E	A	P	G	K	N	W	L	F	F
Query Conservation																.	.																																																.	.	.	.	.	.
Alig confidence																.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	G	V	C	T	G	W	L	A	L	L	V	A	S	V	L	A	P	K	I	S	I	F	P	R	T	T	N	S	F	H	L	P	D	D	P	S	I	P	I	I	M	V	G	P	G	T	G	I	A	P	F	I	G	F	L	Q	H	R	E	K	L	Q	E	Q	H	P	D	G	N	F	G	A	M	W	L	F	F
Template Known Secondary structure															G	G	G	T											S								S	S	T	T	S								G	G	G	G																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	D	G	V	L	T	R	I	D	L	A	W	S	R	D	Q	K	E	K	V	Y	V	Q	D	K	L	R	E	Q	G	A	E	L	W	R	.	W	I	N	D	G	A	H	I	Y	V	C	G	D	A	N	R	M	A	K	D	V	E	Q	A	L
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		G	C	R	H	K	D	R	D	Y	L	F	R	K	E	L	R	H	F	L	K	H	G	I	L	T	H	L	K	V	S	F	S	R	D	A	P	P	A	K	Y	V	Q	D	N	I	Q	L	H	G	Q	Q	V	A	R	I	L	L	Q	E	N	G	H	I	Y	V	C	G	D	A	K	N	M	A	K	D	V	H	D	A	L
Template Known Secondary structure				S		T	T	T			T	T										T	T	S	S								S	S							S								T											S									S
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	I	A	E	F	G	G	M	D	T	E	A	A	D	E	F	L	S	E	L	R	V	E	R	R	Y	Q	R	D	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	I	I	S	K	E	V	G	V	E	K	L	E	A	M	K	T	L	A	T	L	K	E	E	K	R	Y	L	Q	D	I	W
Template Known Secondary structure										T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.