Job Description P38038 Confidence 22.51% Date Thu Jan 5 11:57:50 GMT 2012 Rank 238 Aligned Residues 71 % Identity 21% Template c2nn3D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:caspase-1; PDBTitle: structure of pro-sf-caspase-1 Resolution 3.00 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	.	.	.	.	.	.	.	.	.	.	A	G	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	.	.	.	.	.	.	E	P	P	E	E	A	V	A	L	H	K	F	L	F	S	K
Query Conservation																									.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	V	D	S	D	N	L	S	K	V	L	K	T	L	G	F	K	V	T	V	F	P	N	L	K	S	E	E	I	N	K	F	I	Q	Q	T	A	E	M	D	H	S	D	A	D	C	L	L	V	A	V	L	T	A	G	E	L	G	M	L	Y	A	K	D	T	H	Y	K	P	D	N	L	W	Y	Y	F	T	A	D
Template Known Secondary structure																T	T								T															T	S		G	G	G														T	T					S	S					T					G	G	G	S	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		139	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	K	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	P	T	L	A	G
Template Known Secondary structure		G		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions