Job Description P38038 Confidence 99.94% Date Thu Jan 5 11:57:50 GMT 2012 Rank 39 Aligned Residues 227 % Identity 19% Template c2eixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of physarum polycephalum cytochrome b5 reductase Resolution 1.56 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		T	S	P	Y	S	K	D	A	P	L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	.	.	M	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P	A	L	V	K	E	L	V	E	L	L	W	L	K	G	D	E	P	V	T	V	E
Query Conservation																																										.	.
Alig confidence																							.	.	.	.	.															.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	A	L	N	P	N	E	Y	K	K	F	M	L	R	E	K	Q	I	I	N	.	.	.	.	.	H	N	T	R	L	F	R	F	N	L	H	H	P	E	D	V	V	G	L	P	I	G	Q	H	M	S	V	K	A	T	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S			S	S	S														.	.	.	.	.	T	T									S	S	T	T							T	T										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	L	P	L	N	E	A	L	Q	W	H	F	E	L	T	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	E	T	L	L	P	L	V	G	D	K	A	K	L	Q	H	Y	A	A	T	T	P	I	V	D	M	V	R	F	S	P	A	Q	L	D	A	E	A	L	I	N	L	L	R	P	L	T	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	I	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																														95	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Y	S	I	A	S	S	Q	A	E	V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	V	E	G	R	A	R	A	G	G	A	S	S	F	L	A	D	R	V	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A
Query Conservation
Alig confidence											.															.	.	.	.	.	.	.	.											.																.
Template Conservation											.															.	.	.	.	.	.	.	.											.																.
Template Sequence		R	P	Y	T	P	V	S	S	D	.	D	E	K	G	Y	F	D	L	I	I	K	V	Y	E	.	.	.	.	.	.	.	.	K	G	Q	M	S	Q	Y	I	D	H	.	L	N	P	G	D	F	L	Q	V	R	G	P	K	G	Q	.	F	D	Y	K	P	N	M	V	K	E	M	G	M	I	A	G	G	T	G	I	T
Template Known Secondary structure								S		T	.	T			S										T	.	.	.	.	.	.	.	.	T									T	.			T	T											S	.					T	T	S	S	S								G	G	G
Template Predicted Secondary structure											.															.	.	.	.	.	.	.	.											.																.
Template SS confidence
		99	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.
Predicted Secondary structure																	.																																																								.
Query SS confidence																	.																																																								.
Query Sequence		P	F	R	A	F	M	Q	Q	R	A	A	D	E	A	P	.	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	D	G	V	L	T	R	I	D	L	A	W	S	R	D	Q	K	E	K	V	Y	V	Q	D	K	L	R	E	Q	.	G	A	E	L	W	R	W	I
Query Conservation																	.																																																								.
Alig confidence																	.														.																																										.
Template Conservation																															.
Template Sequence		P	M	L	Q	V	A	R	A	I	I	K	N	P	K	E	K	T	I	I	N	L	I	F	A	N	V	N	E	D	.	D	I	L	L	R	T	E	L	D	D	M	A	K	K	Y	S	N	F	K	V	Y	Y	V	L	N	N	P	P	A	G	W	T	G	G	V	G	F	V	S	A	D	M	I	K	Q	H	F	S	P	P
Template Known Secondary structure												T		T	T														G	G	.	G		T	T												T	T												T	T			S			S	S										S			T
Template Predicted Secondary structure																															.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	G	A	H	I	Y	V	C	G	D	A	N	R	M	A	K	D	V	E	Q	A	L	L	E	V
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		S	S	D	I	K	V	M	M	C	G	P	.	P	M	M	N	K	A	M	Q	G	H	L	E	T	L
Template Known Secondary structure		T	S	S							S	S	.
Template Predicted Secondary structure													.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions