Job Description P38038 Confidence 44.48% Date Thu Jan 5 11:57:50 GMT 2012 Rank 173 Aligned Residues 76 % Identity 12% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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		60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		E	M	P	G	I	T	I	I	S	A	.	.	.	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H	K	F	L
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		M	T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M
Template Known Secondary structure				S									S	S	T	T																		T	T								T	T	T	S		G	G	G	S	G	G	G	T										S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions