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Job DescriptionP38038
Confidence100.00%DateThu Jan 5 11:57:50 GMT 2012
Rank2Aligned Residues537
% Identity32%Templatec2bpoA_
PDB info PDB header:reductaseChain: A: PDB Molecule:nadph-cytochrom p450 reductase; PDBTitle: crystal structure of the yeast cpr triple mutant: d74g,2 y75f, k78a.
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80......... 90.........100.........110 .........120.........130.......
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Query Sequence  EMPGITIISASQTGNARRVAEALRDDLLAA. KLNVKLVNAGDYKFKQIASEK. LLIVVTSTQGEGEPPEEAVALHKFLFS
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Template Sequence  NNKNYLVLYASQTGTAEGFAKAFSKELVAKFNLNVMCADVENYDFESLNDVPVIVSIFISTYGEGDFPDGAVNFEDFICN
Template Known Secondary structure  TT
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SSS


TTSS
GGGGGG

S
BTTTB

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   57..60.........70.........80.........90.........100.........110.........120.........130......
 
   138.140.........150.........160.........170.........180........ .190.........200.........210....
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Query Sequence  KKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADV. . . EYQAAASEWRARVVDALKSRAPVAAP
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Template Sequence  AEAGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQ
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TTSSTT

TTSSSTTTT

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TTTT
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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   215.... 220.........230.........240.........250.........260....
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Query Sequence  SQSVA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLG
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Template Sequence  EAKFTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFSSND. RNCIHSEFDLS
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SB


SS

TTS
SS
SSGGGSTTS




TT

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   217..220.........230.........240.........250.........260.........270.........280.... .....290.....
 
   265....270.........280.........290.........300..... ....310.........320.. .......330...
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Query Sequence  DSGMRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE. . . . . . . . . . GKTLPLNEALQWHFELT. VNTANIVENYA
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Template Sequence  GSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLI
Template Known Secondary structure  TBT



TT





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   296...300.........310.........320.........330.........340.........350.........360.........370.....
 
   334.... .340.........350...... ...360..... ... .370.........380.........390.........400..
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Query Sequence  TLTRS. . . . ETLLPLVGDKAKLQHYAA. . TTPIVDMVR. FSP. . . . AQLDAEALINLLRPLTPRLYSIASSQAEVENEVH
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Template Sequence  QFAPNADVKEKLTLLSKDKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVH
Template Known Secondary structure  TT
SSTT
TGGGT

TT


TTS
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B
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TTT
TT
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   376...380.........390.........400.........410.........420.........430.........440.........450.....
 
   403......410... ......420....... ..430.........440.........450...
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Query Sequence  VTVGVVRYDVE. . . . GRARAGGASSFLAD. . . . . . . . . . . . . . . . . . . . . . . . . RVEEEGEVRVFIEHNDNFRLPANPET
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Template Sequence  VTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSN. FRLPSNPST
Template Known Secondary structure 



SS
TTS


TT

TTTS






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GGGTTTTT


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   456...460.........470.........480.........490.........500.........510.........520..... ....530....
 
   454.....460.........470...... ...480.........490.........500........ .510.........520 .....
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Query Sequence  PVIMIGPGTGIAPFRAFMQQRAA. . . . . . DEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD. GVLTRIDLAWSR. DQKEK
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Template Sequence  PVIMIGPGTGVAPFRGFIRERVAFLESQKNVSLGKHILFYGSRNTD. DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKK
Template Known Secondary structure 
GGGGT







SSSS.S
TTTTTGGGS

TTS

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   535....540.........550.........560.........570.........580 .........590.........600.........610...
 
   526...530.........540.........550.........560.........570.........580.........590.........
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Query Sequence  VYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
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Template Sequence  VYVQDKLKDYEDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW
Template Known Secondary structure 

TTTT

STTTT

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   618.620.........630.........640.........650.........660.........670.........680.........690.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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