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Job DescriptionP38038
Confidence100.00%DateThu Jan 5 11:57:50 GMT 2012
Rank11Aligned Residues275
% Identity30%Templatec2b5oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: ferredoxin-nadp reductase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  IHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGMRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE
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Template Sequence  VPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED. . . . . . . . . . . . . . . . . . . . .
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   112.......120.........130.........140.........150.........160.........170
 
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Query Sequence  GKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTP
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Template Known Secondary structure  ........................................................................TTT


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Query Sequence  RLYSIASSQAEVE. . . NEVHVTVGVVRYDVE. . GRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGP
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Template Sequence  RLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEMLLPDDEDATVVMLAT
Template Known Secondary structure  B
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
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Query Sequence  GTGIAPFRAFMQQRAADEA. . . . . PGKNWLFFGNPHFTEDFLYQVEWQRYVKDGV. LTRIDLAWSRDQK. . . . EKVYVQD
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Template Sequence  GTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTA. NILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQS
Template Known Secondary structure  GGGGT


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SSSGG.G
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   259260.........270.........280.........290...... ...300.........310.........320.........330.......
 
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Query Sequence  KLREQGAELWRWIND. GAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
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Template Sequence  RVSEYADELFEMIQKPNTHVYMCGL. KGMQPPIDETFTAEAEKRG. . . . LNWEEMRRSMKKEHRWHVEVY
Template Known Secondary structure  TTSTT
.GGGTT....

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   338.340.........350.........360.. .......370.........380. ........390.........400..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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