Job Description P38038 Confidence 100.00% Date Thu Jan 5 11:57:50 GMT 2012 Rank 12 Aligned Residues 280 % Identity 31% Template c1fncA_ PDB info PDB header:oxidoreductase (nadp+(a),ferredoxin(a)) Chain: A: PDB Molecule:ferredoxin-nadp+ reductase; PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states Resolution 2.00 Å

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	A	V	N	E	I	H	T	S	P	Y	S	K	D	A	P	L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	M	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P	A	L	V	K	E	L	V	E	L	L	W	L	K	G
Query Conservation
Alig confidence																																																	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	K	M	E	E	G	I	T	V	N	K	F	K	P	K	T	P	Y	V	G	R	C	L	L	N	T	K	I	T	G	D	D	A	P	G	E	T	W	H	M	V	F	S	H	E	G	.	E	I	P	Y	R	E	G	Q	S	V	G	V	I	P	D	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	B	S		T	T					S	B	B	T	T	B													S		T	T	S	S	S										T	T	.						T	T								S	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	V	T	V	E	G	K	T	L	P	L	N	E	A	L	Q	W	H	F	E	L	T	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	E	T	L	L	P	L	V	G	D	K	A	K	L	Q	H	Y	A	A	T	T	P	I	V	D	M	V	R	F	S	P	A	Q	L	D	A	E	A	L	I	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																																	85
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																				.	.	.																		.
Query SS confidence																				.	.	.																		.
Query Sequence		L	L	R	P	L	T	P	R	L	Y	S	I	A	S	S	Q	A	E	.	.	.	V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	V	E	.	G	R	A	R	A	G	G	A	S	S	F	L	A	D	R	V	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P
Query Conservation																				.	.	.																		.
Alig confidence																				.	.	.																		.															.
Template Conservation																																																							.
Template Sequence		N	G	K	P	H	K	L	R	L	Y	S	I	A	S	S	A	L	G	D	F	G	D	A	K	S	V	S	L	C	V	K	R	L	I	Y	T	N	D	A	G	E	T	I	K	G	V	C	S	N	F	L	C	D	.	L	K	P	G	A	E	V	K	L	T	G	P	V	G	K	E	M	L	M	P	K	D	P	N	A	T
Template Known Secondary structure		T	S		B										S		T	T	T	T	T	T	S	S															T	T	S													T	.			T	T											S	T	T			B	S		T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.						.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																														.															.	.	.	.
Query SS confidence																													.	.	.	.	.																														.															.	.	.	.
Query Sequence		V	I	M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A	D	E	A	P	G	.	.	.	.	.	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	D	G	V	.	L	T	R	I	D	L	A	W	S	R	D	Q	K	E	.	.	.	.
Query Conservation																													.	.	.	.	.																														.															.	.	.	.
Alig confidence																													.	.	.	.	.													.																	.															.	.	.	.
Template Conservation																																														.
Template Sequence		I	I	M	L	G	T	G	T	G	I	A	P	F	R	S	F	L	W	K	M	F	F	E	K	H	D	D	Y	K	F	N	G	L	A	W	L	F	L	G	V	P	T	S	S	.	S	L	L	Y	K	E	E	F	E	K	M	K	E	K	A	P	D	N	F	R	L	D	F	A	V	S	R	E	Q	T	N	E	K	G	E
Template Known Secondary structure								G	G	G	G												S			B	T	T	B				S									S	S	G	G	.	G		T	T												T	T	T								T	T	T		B		T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	V	Y	V	Q	D	K	L	R	E	Q	G	A	E	L	W	R	W	I	N	D	.	G	A	H	I	Y	V	C	G	D	A	N	R	M	A	K	D	V	E	Q	A	L	L	E	V	I	A	E	F	G	G	M	D	T	E	A	A	D	E	F	L	S	E	L	R	V	E	R	R	Y	Q	R	D	V	Y
Query Conservation																							.
Alig confidence																							.										.																				.	.	.	.
Template Conservation																																	.																				.	.	.	.
Template Sequence		K	M	Y	I	Q	T	R	M	A	Q	Y	A	V	E	L	W	E	M	L	K	K	D	N	T	Y	V	Y	M	C	G	L	.	K	G	M	E	K	G	I	D	D	I	M	V	S	L	A	A	A	E	G	.	.	.	.	I	D	W	I	E	Y	K	R	Q	L	K	K	A	E	Q	W	N	V	E	V	Y
Template Known Secondary structure		B									T	T								T	T	S	T	T									.																	T	T	T	.	.	.	.													T	T
Template Predicted Secondary structure																																	.																				.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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