Job Description P38038 Confidence 20.42% Date Thu Jan 5 11:57:50 GMT 2012 Rank 247 Aligned Residues 80 % Identity 23% Template c1cvrA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:gingipain r; PDBTitle: crystal structure of the arg specific cysteine proteinase gingipain r2 (rgpb) Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	P	A	A	E	M	P	G	I	T	I	I	S	A	S	Q	T	G	N	A	R	R	V	A	E	A	L	R	D	D	L	L	A	A	K	L	N	V	K	L	V	N	A	G	D	Y	K	F	K	Q	I	A	S	E	K	L	L	I	V	V	T	S	T	Q	G	E	G	E	P	P	E	E	A	V	A	L	H	K
Query Conservation
Alig confidence																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	V	E	E	K	E	N	G	R	M	I	V	I	V	A	K	K	Y	E	G	D	.	.	.	I	K	D	F	V	D	W	K	N	Q	R	G	L	R	T	E	V	K	V	A	E	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	V	T	A	N	A	I	Q	Q	F	V	K
Template Known Secondary structure								T	T									G	G	G	G	G	G	.	.	.											T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																			.	.	.	50	.	.	.	.	.	.	.	.	.	60
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	F	S	K	K	A	P	K	L	E	N	T	A	F	A	V	F	S	L	G	D	S	S	Y
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		Q	E	Y	E	K	E	G	N	D	L	T	.	.	.	.	Y	V	L	L	V	G	D	H	K	D
Template Known Secondary structure						S	T	T					.	.	.	.						S		T	T	T
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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