 |
Job Description | P06992 | Confidence | 98.37% | Date | Thu Jan 5 10:59:48 GMT 2012 |
Rank | 236 | Aligned Residues | 86 |
% Identity | 16% | Template | d2oyra1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| YhiQ-like
|
Resolution | 2.00 |
|
 |
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | I | V | S | A | I | N | P | Q | K | G | Q | . |
. |
A | M | V | E | I | G | P | G | L | A | A | L | T | E | P | V | G | E | R | L | D | Q | L | T | V | I | E | L | D | R | D | L | A | A | R | L | Q | T | H | P | F | L | G | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | T | I | Y | Q | Q | D | A | M |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |   | . | . |   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
Template Sequence |   |
E | A | V | A | K | A | V | G | I | K | G | D | Y | L | P | D | V | V | D | A | T | A | G | L | G | R | D | A | F | V | L | A | S | V | G | C | R | V | R | X | L | E | R | N | P | V | V | A | A | L | L | D | D | G | L | A | R | G | Y | A | D | A | E | I | G | G | W | L | Q | E | R | L | Q | L | I | H | A | S | S | L |
Template Known Secondary structure |   |
S |  |  |  |  |  | T | T |
| B | T | T | B |
|
|
|  |  |  | T | T |
| T | T |
|  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | N | F | G | E | L | A | E | K | M | G | Q | P | L | R | V | F | G | N | L | P | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
Template Sequence |   |
T | A | . |
. |
. |
. |
L | T | D | I | T | P | R | P | Q | V | V | Y | L | D | P | X | F |
Template Known Secondary structure |   |
 |  | . | . | . | . | S | T | T |
| S | S |
|
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | |
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|