 |
Job Description | P06992 | Confidence | 99.07% | Date | Thu Jan 5 10:59:48 GMT 2012 |
Rank | 86 | Aligned Residues | 115 |
% Identity | 9% | Template | d2nxca1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Ribosomal protein L11 methyltransferase PrmA
|
Resolution | 1.59 |
|
 |
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | N | F | L | N | D | Q | F | V | I | D | S | I | V | S | A | I | N | P | Q | K | G | Q | A | M | V | E | I | G | P | G | L | A | A | L | T | E | P | V | G | E | R | L | D | Q | L | T | V | I | E | L | D | R | D | L | A | A | R | L | Q | T | H | P | F | L | G | P | . |
K | L | T | I | Y | Q | Q | D | A | M | T |
Query Conservation |   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   | . | . |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | G | H | H | E | T | T | R | L | A | L | K | A | L | A | R | H | . |
. |
L | R | P | G | D | K | V | L | D | L | G | T | G | S | G | V | L | A | I | A | A | E | K | L | G | G | K | A | L | G | V | D | I | D | P | M | V | L | P | Q | A | E | A | N | A | K | R | N | G | V | R | P | R | F | L | E | G | S | L | E | A |
Template Known Secondary structure |   |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
| T | T |
|  |  |  |  |  | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | N | F | G | E | L | A | E | K | M | G | Q | P | L | R | V | F | G | N | L | P | Y | N | I | S | T | P | L | M | F | H | L | F | S | Y | T | D | A | I | A | D | M | H | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . | . |   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
Template Sequence |   |
A | L | P | F | G | . |
. |
. |
. |
. |
. |
P | F | D | L | L | V | A | N | L | Y | A | E | L | H | A | A | L | A | P | R | Y | R | E | A | L | V | P | G | G | R | A | L | L |
Template Known Secondary structure |   |
 | G | G | G |
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|