 |
Job Description | P06992 | Confidence | 74.69% | Date | Thu Jan 5 10:59:48 GMT 2012 |
Rank | 359 | Aligned Residues | 42 |
% Identity | 12% | Template | d2cpza1 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | UNK |
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | M | G | Q | P | L | R | V | F | G | N | L | P | Y | N | I | S | T | P | L | M | F | H | L | F | S | Y | T | D | A | I | A | D | M | H | F | M | L | Q | K | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | G | P | E | G | A | N | L | F | I | Y | H | L | P | Q | E | F | G | D | Q | D | L | L | Q | M | F | M | P | F | G | N | V | V | S | A | K | V | F | I | D | K | Q |
Template Known Secondary structure |   |
|
| S | T | T |
|
|  |  |  |  | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  | G | G | G | S |
|
| S |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
396 | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|