Job Description P06992 Confidence 100.00% Date Thu Jan 5 10:59:48 GMT 2012 Rank 3 Aligned Residues 246 % Identity 48% Template c3tqsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal rna small subunit methyltransferase a; PDBTitle: structure of the dimethyladenosine transferase (ksga) from coxiella2 burnetii Resolution 1.98 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	F	L	N	D	Q	F	V	I	D	S	I	V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	H	F	L	H	D	S	F	V	L	Q	K	I	V	S	A	I	H	P	Q	K	T	D	T	L	V	E	I	G	P	G	R	G	A	L	T	D	Y	L	L	T	E	C	D	N	L	A	L	V	E	I	D	R	D	L	V	A	F	L	Q	K	K	Y	N	Q	Q	K	N	I	T	I	Y	Q	N	D	A	L	Q	F	D
Template Known Secondary structure																						T	T									T	T	T	T	T					T	T	T	S	S																				T	T		T	T						S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	L	A	E	K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	T	P	L	M	F	H	L	F	S	Y	T	D	A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q	Y	Y	C	N	V	I	P	V	L	E	V
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		F	S	S	V	.	.	K	T	D	K	P	L	R	V	V	G	N	L	P	Y	N	I	S	T	P	L	L	F	H	L	F	S	Q	I	H	C	I	E	D	X	H	F	X	L	Q	K	E	V	V	R	R	I	T	A	E	V	G	S	H	D	Y	G	R	L	S	V	X	A	Q	Y	F	C	D	N	T	Y	L	F	T	V
Template Known Secondary structure		G	G	G	S	.	.			S	S																							T	G	G	G																	T			T	T	S	T	T		S
Template Predicted Secondary structure						.	.
Template SS confidence
		92	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	S	A	F	T	P	P	P	K	V	D	S	A	V	V	R	L	V	P	H	A	T	M	P	H	P	V	K	D	V	R	V	L	S	R	I	T	T	E	A	F	N	Q	R	R	K	T	I	R	N	S	L	G	N	L	F	S	V	E	V	L	T	G	M	G	I	D	P	A	M	R	A	E	N	I	S	V	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	Q	A	F	T	P	P	P	R	V	E	S	A	I	I	R	L	I	P	R	H	N	F	T	P	V	A	K	N	L	D	Q	L	S	H	V	V	K	E	A	F	S	Y	R	R	K	T	V	G	N	A	L	K	K	L	I	N	P	S	Q	W	P	L	L	E	I	N	P	Q	L	R	P	Q	E	L	T	V	E	D
Template Known Secondary structure			G	G	G			S			S	S												S		S	S			S															S	T	T	S						T	T	T	T			G	G	G					T			T	T	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	Q	M	A	N	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	K	I	S	N	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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