Job Description P06992 Confidence 99.10% Date Thu Jan 5 10:59:48 GMT 2012 Rank 81 Aligned Residues 162 % Identity 15% Template c3ofkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) Resolution 1.85 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	V	I	D	S	I	V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	H	T	Q	L	L	R	L	S	L	S	S	G	A	V	S	N	G	L	E	I	G	C	A	A	G	A	F	T	E	K	L	A	P	H	C	K	R	L	T	V	I	D	V	M	P	R	A	I	G	R	A	C	Q	R	T	K	R	W	S	H	I	S	W	A	A	T	D	I	L	Q	F	S	T	A	E	L	F	D
Template Known Secondary structure												T	T	T	S	S										T	T	S							G	G	G									S												T	T	T		S	S								T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	T	.	.	.	.	.	P	L	M	F	H	L	F	S	Y	T	D	A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q	Y	Y	C	N	V	I	P	V	L	E	V	P
Query Conservation																				.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.																																																							.
Template Sequence		.	.	.	.	.	L	I	V	V	A	E	V	L	Y	Y	L	E	D	M	T	Q	M	R	T	A	I	D	N	M	V	K	M	L	A	P	G	G	H	L	V	F	G	S	A	R	D	A	T	C	R	R	W	G	H	V	A	G	A	E	.	T	V	I	T	I	L	T	E	A	L	T	E	V	E	R	V	Q	C	Q	G
Template Known Secondary structure		.	.	.	.	.						S		G	G	G	S	S	S														T																				T	T		S					.										S
Template Predicted Secondary structure		.	.	.	.	.																																																							.
Template SS confidence
							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	F	T	P	P	P	K	V	D	S	A	V	V	R	L	V
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	S	A	D	E	D	C	L	L	A	R	F	R
Template Known Secondary structure		.	.	.	.	.	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							184	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions