Job Description P06992 Confidence 99.52% Date Thu Jan 5 10:59:48 GMT 2012 Rank 18 Aligned Residues 178 % Identity 20% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																								.	.	.	.																													.	.	.	.	.
Query SS confidence																								.	.	.	.																													.	.	.	.	.
Query Sequence		R	K	R	F	G	Q	N	F	L	N	D	Q	F	V	I	D	S	I	V	S	A	I	.	.	.	.	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	Q	.	.	.	.	.	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G
Query Conservation																								.	.	.	.																													.	.	.	.	.
Alig confidence								.																.	.	.	.																													.	.	.	.	.
Template Conservation								.
Template Sequence		G	K	K	A	G	E	.	F	Y	T	P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H
Template Known Secondary structure					S	B		.																	T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T
Template Predicted Secondary structure								.
Template SS confidence
		193	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
						83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																											120	.	.	.	.	.	.	.	.	.	130		.
Predicted Secondary structure		.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence		.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		.	.	.	.	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A	E	K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	M	F	H	L	F	S	Y	T	.	D
Query Conservation		.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.	.																	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																						.	.
Template Sequence		G	V	P	I	E	N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	.	.	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q
Template Known Secondary structure		T			G	G	G						S		T	T	T	S		S		.	.		S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T
Template Predicted Secondary structure																						.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q	Y	Y	C	N	V	I	P	V	L	E	V	P	P	S	A	F	T	P	P	P	K	V	D	S	A	V	V	R	L	V	P	H	A	T
Query Conservation
Alig confidence																		.	.	.	.	.	.																															.
Template Conservation																		.	.	.	.	.	.																															.
Template Sequence		D	N	G	V	X	A	I	V	L	P	H	G	V	L	F	R	.	.	.	.	.	.	G	N	A	E	G	T	I	R	K	A	L	L	E	E	G	A	I	D	T	V	I	G	L	P	A	N	I	F	F	N	.	T	S	I	P	T	T	V	I	I	L	K	K	N	R	T
Template Known Secondary structure		T	T									T						.	.	.	.	.	.														T	T										S	S		S	S	S	.												S	S		S
Template Predicted Secondary structure																		.	.	.	.	.	.																															.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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