Job Description P06992 Confidence 98.58% Date Thu Jan 5 10:59:48 GMT 2012 Rank 205 Aligned Residues 95 % Identity 17% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																						.	.
Query SS confidence																																					.	.																						.	.
Query Sequence		F	V	I	D	S	I	V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	.	.	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	.	.	F	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E
Query Conservation																																					.	.																						.	.
Alig confidence																																					.	.																						.	.
Template Conservation
Template Sequence		T	G	A	R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F
Template Known Secondary structure												S		G	G	G							S		G	G	G										S	T	T								S												S					T	T	T						S								T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	T	P
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	P	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P
Template Known Secondary structure		.	.	.		T	T										S	T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions