Job Description P06992 Confidence 100.00% Date Thu Jan 5 10:59:48 GMT 2012 Rank 4 Aligned Residues 248 % Identity 36% Template c3fuxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dimethyladenosine transferase; PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121 Resolution 1.68 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	G	H	L	A	R	K	R	F	G	Q	N	F	L	N	D	Q	F	V	I	D	S	I	V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	P	K	L
Query Conservation
Alig confidence																																.																																															.
Template Conservation																																.																																															.
Template Sequence		R	H	G	L	F	A	D	K	R	F	G	Q	N	F	L	V	S	E	A	H	L	R	R	I	V	E	A	A	R	P	.	F	T	G	P	V	F	E	V	G	P	G	L	G	A	L	T	R	A	L	L	E	A	G	A	E	V	T	A	I	E	K	D	L	R	L	R	P	V	L	E	E	T	L	S	G	L	.	P	V
Template Known Secondary structure			T	T					G	G	G	T																				.			S								T	T	S									T	T								S		G	G	G								T	T	T	S	.
Template Predicted Secondary structure																																.																																															.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A	E	K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	T	P	L	M	F	H	L	F	S	Y	T	D	A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q
Query Conservation
Alig confidence																		.	.	.	.																											.
Template Conservation																		.	.	.	.																											.
Template Sequence		R	L	V	F	Q	D	A	L	L	Y	P	W	E	E	V	P	.	.	.	.	Q	G	S	L	L	V	A	N	L	P	Y	H	I	A	T	P	L	V	T	R	L	L	K	T	G	R	.	F	A	R	L	V	F	L	V	Q	K	E	V	A	E	R	M	T	A	R	P	K	T	P	A	Y	G	V	L	T	L	R	V	A
Template Known Secondary structure						S		G	G	G	S		G	G	G	S		.	.	.	.	T	T									T	T	T														.																				T	T	S	T	T		S
Template Predicted Secondary structure																		.	.	.	.																											.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.						.	.	.	.	.	240
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		Y	Y	C	N	V	I	P	V	L	E	V	P	P	S	A	F	T	P	P	P	K	V	D	S	A	V	V	R	L	V	P	H	A	T	M	P	H	P	V	K	D	V	R	V	L	S	R	I	T	T	E	A	F	N	Q	R	R	K	T	I	R	N	S	L	G	N	L	F	S	.	.	.	.	.	V	E	V	L	T	G
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																				.	.	.	.	.																															.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		H	H	A	V	A	E	R	L	F	D	L	P	P	G	A	F	F	P	P	P	K	V	W	S	S	L	V	R	L	T	P	T	G	A	.	.	.	.	.	L	D	D	P	G	L	F	R	L	V	E	A	A	F	G	K	R	R	K	T	L	L	N	A	L	A	A	A	G	Y	P	K	A	R	V	E	E	A	L	R	A
Template Known Secondary structure														G	G	G			S			S	S											S		.	.	.	.	.														T	T	S	T	T	S									T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	I	D	P	A	M	R	A	E	N	I	S	V	A	Q	Y	C	Q	M	A	N	Y	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	P	P	R	V	R	A	E	E	L	D	L	E	A	F	R	R	L	R	E	G	L	E
Template Known Secondary structure		T	T			T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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