Job Description P06992 Confidence 100.00% Date Thu Jan 5 10:59:48 GMT 2012 Rank 11 Aligned Residues 232 % Identity 35% Template c3fteA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna Resolution 3.00 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		N	D	Q	F	V	I	D	S	I	V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	.	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E
Query Conservation																																										.
Alig confidence																																										.																					.	.
Template Conservation																																																															.	.
Template Sequence		V	S	E	G	V	L	K	K	I	A	E	E	L	N	I	E	E	G	N	T	V	V	E	V	G	G	G	T	G	N	L	T	K	V	L	L	Q	H	P	L	K	K	L	Y	V	I	E	L	D	R	E	M	V	E	N	L	K	S	I	G	D	.	.	E	R	L	E	V	I	N	E	D	A	S	K	F	P	F	C	S
Template Known Secondary structure																		T	T							S			S	S							T	T	S			S							S		T	T	T	G	G	G	G		S	S			.	.	T	T	B			B		S		T	T	S			G	G	G
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	K	M	G	Q	P	L	R	V	F	G	N	L	P	Y	N	I	S	T	P	L	M	F	H	L	F	S	Y	T	D	A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q	Y	Y	C	N	V	I	P	V	L	E	V	P	P	S
Query Conservation
Alig confidence				.	.	.	.																																												.	.	.
Template Conservation				.	.	.	.																																												.	.	.
Template Sequence		L	G	.	.	.	.	K	E	L	K	V	V	G	N	L	P	Y	N	V	A	S	L	I	I	E	N	T	V	Y	N	K	D	C	V	P	L	A	V	F	M	V	Q	K	E	V	A	E	K	L	.	.	.	Q	G	K	K	D	T	G	W	L	S	V	F	V	R	T	F	Y	D	V	N	Y	V	M	T	V	P	P	R
Template Known Secondary structure		T		.	.	.	.	S	S	B								T	T	T										T	T	G	G	G		S															.	.	.		S	S	S																							T	T
Template Predicted Secondary structure				.	.	.	.																																												.	.	.
Template SS confidence
		92	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	P	P	P	K	V	D	S	A	V	V	R	L	V	P	H	A	T	M	P	H	P	V	K	D	V	R	V	L	S	R	I	T	T	E	A	F	N	Q	R	R	K	T	I	R	N	S	L	G	N	L	F	S	V	E	V	L	T	G	M	G	I	D	P	A	M	R	A	E	N	I	S	V	A	Q	Y	C	Q
Query Conservation
Alig confidence																								.	.																											.	.	.	.
Template Conservation																								.	.																											.	.	.	.
Template Sequence		F	F	V	P	P	P	K	V	Q	S	A	V	I	K	L	V	K	N	E	K	F	P	.	.	V	K	D	L	K	N	Y	K	K	F	L	T	K	I	F	Q	N	R	R	K	V	L	R	K	K	I	.	.	.	.	P	E	E	L	L	K	E	A	G	I	N	P	D	A	R	V	E	Q	L	S	L	E	D	F	F	K
Template Known Secondary structure		S	S	S	S			S	S													S		.	.		S														T	T	T	T	S	B					S	.	.	.	.						T	T	T	T			T	T	S	B	T	T	S			T
Template Predicted Secondary structure																								.	.																											.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	N	Y	L	A	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	R	L	I	E	D	S
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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