 |
Job Description | P06992 | Confidence | 99.30% | Date | Thu Jan 5 10:59:48 GMT 2012 |
Rank | 41 | Aligned Residues | 125 |
% Identity | 14% | Template | c3e05B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:precorrin-6y c5,15-methyltransferase (decarboxylating); |
PDBTitle: crystal structure of precorrin-6y c5,15-methyltransferase from2 geobacter metallireducens gs-15
|
Resolution | 1.80 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | D | Q | F | V | I | D | S | I | V | S | A | I | N | P | Q | K | G | Q | A | M | V | E | I | G | P | G | L | A | A | L | T | E | P | V | G | E | R | L | . |
. |
D | Q | L | T | V | I | E | L | D | R | D | L | A | A | R | L | Q | T | H | P | F | L | G | . |
. |
P | K | L | T | I | Y | Q | Q | D | A | M | T | F |
Query Conservation |   |
|   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |   | . | . |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | T | K | Q | E | V | R | A | V | T | L | S | K | L | R | L | Q | D | D | L | V | M | W | D | I | G | A | G | S | A | S | V | S | I | E | A | S | N | L | M | P | N | G | R | I | F | A | L | E | R | N | P | Q | Y | L | G | F | I | R | D | N | L | K | K | F | V | A | R | N | V | T | L | V | E | A | F | A | P | E | G |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |
|
| T | T | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
. | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | F | G | E | L | A | E | K | M | G | Q | P | L | R | V | F | G | N | L | P | Y | N | I | S | T | P | L | M | F | H | L | F | S | Y | T | D | A | I | A | D | M | H | F | . |
M | L | Q | K | E | V | V | N | R | L | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|
|
|   |
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
L | D | D | L | P | D | P | D | R | V | F | I | G | G | S | G | G | M | L | E | E | I | I | D | A | V | D | R | R | L | K | S | E | G | V | I | V | L | N | A | V | T | L | D | T | L | T | K | A | V |
Template Known Secondary structure |   |
. | . | . | . | . |
| T | T | S |
|
|
| S |  |  |  |  | S |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|