Job Description P06992 Confidence 98.28% Date Thu Jan 5 10:59:48 GMT 2012 Rank 241 Aligned Residues 82 % Identity 17% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																	.	.																					.	.	.	.	.	.
Query SS confidence																																	.	.																					.	.	.	.	.	.
Query Sequence		V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	.	.	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	.	.	.	.	.	.	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A
Query Conservation																																	.	.																					.	.	.	.	.	.
Alig confidence																																	.	.																					.	.	.	.	.	.																.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		T	S	L	C	S	H	P	K	P	E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	.	.	.	.	V	R
Template Known Secondary structure					T	T	S	S											T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S						.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.
		102	.		.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		E	K	.	M	G	Q	P	L	R	V	F	G	N	L	P
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		Q	T	P	D	N	T	Y	D	V	V	I	I	D	T	T
Template Known Secondary structure		T	S		T	T										S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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