Job Description P06992 Confidence 98.22% Date Thu Jan 5 10:59:48 GMT 2012 Rank 249 Aligned Residues 82 % Identity 18% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																	.	.																							.	.	.	.	.	.
Query SS confidence																																	.	.																							.	.	.	.	.	.
Query Sequence		V	S	A	I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	V	G	E	R	L	D	.	.	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	.	.	.	.	.	.	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A
Query Conservation																																	.	.																							.	.	.	.	.	.
Alig confidence																																	.	.																							.	.	.	.	.	.														.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		L	P	L	C	S	I	P	N	P	K	K	V	L	V	I	G	G	G	D	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	.	.	.	.	L	K
Template Known Secondary structure					T	T	S	S	S								S		S	S	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S						.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.
		102	.	.	.		.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		E	K	M	G	.	Q	P	L	R	V	F	G	N	L	P
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		N	A	A	E	G	S	Y	D	A	V	I	V	D	S	S
Template Known Secondary structure		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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