Job Description P06992 Confidence 60.09% Date Thu Jan 5 10:59:48 GMT 2012 Rank 396 Aligned Residues 38 % Identity 18% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		I	N	P	Q	K	G	Q	A	M	V	E	I	G	P	G	L	A	A	L	T	E	P	.	.	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R
Template Known Secondary structure				S	S		S									B													T	T								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions