Job Description P06992 Confidence 62.95% Date Thu Jan 5 10:59:48 GMT 2012 Rank 387 Aligned Residues 129 % Identity 14% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		36	.	.	.	40	.	.	.	.	.	.	.		.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure														.			.
Query SS confidence														.			.
Query Sequence		Q	K	G	Q	A	M	V	E	I	G	P	G	.	L	A	.	A	L	T	E	P	V	G	E	R	L	D	Q	L	T	V	I	E	L	D	R	D	L	A	A	R	L	Q	T	H	P	F	L	G	P	K	L	T	I	Y	Q	Q	D	A	M	T	F	N	F	G	E	L	A	E	K	M	G	Q	P	L	R	V	F	G	N
Query Conservation														.			.
Alig confidence														.			.																														.	.	.	.																				.
Template Conservation																																															.	.	.	.																				.
Template Sequence		Q	K	S	K	Y	I	V	I	F	G	C	G	R	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	.	.	.	.	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	.	G	M	E	K	A	D	M	V	F	A	F
Template Known Secondary structure													S													T	T								S		G	G	G	G	G	G	S		T	T	.	.	.	.			S					S		T	T	S						T	T	.	T	G	G	G		S
Template Predicted Secondary structure																																															.	.	.	.																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Y	N	I	S	T	P	L	M	F	H	L	F	S	Y	T	D	A	I	A	D	M	H	F	M	L	Q	K	E	V	V	N	R	L	V	A	G	P	N	S	K	A	Y	G	R	L	S	V	M	A	Q	Y	Y	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	D	D	S	T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V	E	N	V	I	A	R	V	Y	D	P	E	K	I	K	I	F	E	E	N	G	I	K	T	I	C	P	A	V	L	M	I	E	K	V	K	E
Template Known Secondary structure		S	S															T	S			S							S	S	G	G	G						T	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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