 |
| Job Description | P06992 | | Confidence | 62.54% | Date | Thu Jan 5 10:59:48 GMT 2012 |
| Rank | 389 | Aligned Residues | 31 |
| % Identity | 16% | Template | c2f3jA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:rna and export factor binding protein 2; |
PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155).
|
| Resolution | UNK |
|
| | |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | |  |
|
|
|
|
|
|  | | | | | | | | | |
|
|
|
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | V | F | G | N | L | P | Y | N | I | S | T | P | L | M | F | H | L | F | S | Y | T | D | A | I | A | D | M | H | F | M |
| Query Conservation | |
|
|
| |
|
|
|
| |
| |
| |
|
| | | |
| | | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| |
|
|
| | | |
|
| | |
| | | |
| | | |
| |
| | | | | | |
| Template Sequence | |
L | L | V | S | N | L | D | F | G | V | S | D | A | D | I | Q | E | L | F | A | E | F | G | T | L | K | K | A | A | V | D |
| Template Known Secondary structure | |
| | | |
|
|
| S |
|
|
| | | | | | | | | | | T | S |
|
| S | | | | |
|
| Template Predicted Secondary structure | |
| | |
|
|
|
|
|
|
|
| | | | | | | | | | |
|
|
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
